Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00193590

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00193590NamePublic_nameWBVar00193590
Other_namehaw60866
F52G2.1b.1:c.1016+496T>C
F52G2.1c.1:c.716+496T>C
F52G2.1a.1:c.968+496T>C
F52G2.1d.1:c.446+496T>C
HGVSgCHROMOSOME_IV:g.13517759A>G
Sequence_detailsSMapS_parentSequenceF52G2
Flanking_sequencesaatttgtgccgaaactacggtgaaaaaaaatcccggtctcggcacgacaa
Mapping_targetF52G2
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00003582
TranscriptF52G2.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52G2.1d.1:c.446+496T>C
Intron_number2/4
F52G2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52G2.1c.1:c.716+496T>C
Intron_number3/5
F52G2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52G2.1b.1:c.1016+496T>C
Intron_number3/6
F52G2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52G2.1a.1:c.968+496T>C
Intron_number5/8
Remark[20081124 db] this Variation was previously named hw60866
MethodWGS_Hawaiian_Waterston