WormBase Tree Display for Variation: WBVar00193614
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| WBVar00193614 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00193614 | |||
| Other_name | haw60890 | ||||
| haw155518 | |||||
| cewivar00210778 | |||||
| F52G2.2b.1:c.761+546A>G | |||||
| F52G2.2a.1:c.1331+546A>G | |||||
| HGVSg | CHROMOSOME_IV:g.13533724T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F52G2 | |
| Flanking_sequences | tgagtgcctttaaaatgatgaaaat | cgaaaaattggcagttcgtggcata | |||
| Mapping_target | F52G2 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00575383 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004681 | |||
| Transcript | F52G2.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52G2.2a.1:c.1331+546A>G | ||||
| Intron_number | 7/21 | ||||
| F52G2.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F52G2.2b.1:c.761+546A>G | ||||
| Intron_number | 4/17 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw60890 | ||||
| Method | WGS_Hawaiian_Waterston |
