WormBase Tree Display for Variation: WBVar00193910
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| WBVar00193910 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00193910 | |||
| Other_name | haw61186 | ||||
| haw155703 | |||||
| cewivar00211140 | |||||
| C47A4.2c.1:c.260-109T>A | |||||
| C47A4.2a.1:c.446-109T>A | |||||
| C47A4.2b.1:c.464-109T>A | |||||
| HGVSg | CHROMOSOME_IV:g.13730057T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C47A4 | |
| Flanking_sequences | attttgtgcccacacttgatttttt | aaaaatattttcactgtttcaaaga | |||
| Mapping_target | C47A4 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00575568 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008123 | |||
| Transcript | C47A4.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47A4.2b.1:c.464-109T>A | ||||
| Intron_number | 4/10 | ||||
| C47A4.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47A4.2a.1:c.446-109T>A | ||||
| Intron_number | 4/10 | ||||
| C47A4.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47A4.2c.1:c.260-109T>A | ||||
| Intron_number | 2/7 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw61186 | ||||
| Method | WGS_Hawaiian_Waterston |
