WormBase Tree Display for Variation: WBVar00194055
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| WBVar00194055 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00194055 | |||
| Other_name | haw61331 | ||||
| haw155780 | |||||
| cewivar00211304 | |||||
| CE16170:p.Pro243Ser | |||||
| H08M01.2b.1:c.1926+1198G>A | |||||
| H08M01.1.1:c.727C>T | |||||
| HGVSg | CHROMOSOME_IV:g.13834790G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | H08M01 | |
| Flanking_sequences | attactcactgtctggaagctgatg | atccaaggttccgggtgctgctctg | |||
| Mapping_target | H08M01 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00575645 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00010373 | |||
| WBGene00010374 | |||||
| Transcript | H08M01.1.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | H08M01.1.1:c.727C>T | ||||
| HGVSp | CE16170:p.Pro243Ser | ||||
| cDNA_position | 762 | ||||
| CDS_position | 727 | ||||
| Protein_position | 243 | ||||
| Exon_number | 9/12 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| H08M01.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H08M01.2b.1:c.1926+1198G>A | ||||
| Intron_number | 9/22 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw61331 | ||||
| Method | WGS_Hawaiian_Waterston |
