WormBase Tree Display for Variation: WBVar00194280
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| WBVar00194280 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00194280 | |||
| Other_name | haw61556 | ||||
| haw155909 | |||||
| cewivar00211575 | |||||
| Y37A1B.17a.1:c.2740-141C>T | |||||
| Y37A1B.17c.1:c.2329-141C>T | |||||
| HGVSg | CHROMOSOME_IV:g.13974258G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y37A1B | |
| Flanking_sequences | ttttttgtatagagtttgtgaagag | ttatcaattctgaacaaggccggtg | |||
| Mapping_target | Y37A1B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00575774 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00044989 | |||
| Transcript | Y37A1B.17c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37A1B.17c.1:c.2329-141C>T | ||||
| Intron_number | 12/16 | ||||
| Y37A1B.17a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37A1B.17a.1:c.2740-141C>T | ||||
| Intron_number | 16/21 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw61556 | ||||
| Method | WGS_Hawaiian_Waterston |
