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WormBase Tree Display for Variation: WBVar00195250

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Name Class

WBVar00195250EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00195250
Other_namehaw62526
cewivar00212705
Y57G11A.1f.1:c.788-6T>A
Y57G11A.1e.1:c.812-6T>A
Y57G11A.1d.1:c.788-6T>A
Y57G11A.1b.1:c.788-6T>A
HGVSgCHROMOSOME_IV:g.14500526A>T
Sequence_detailsSMapS_parentSequenceY57G11A
Flanking_sequencesagaggcagcgtgctcgtcttctggaatattcattgttaaagcggatagca
Mapping_targetY57G11A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01455491
StatusLive
AffectsGeneWBGene00013289
TranscriptY57G11A.1f.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY57G11A.1f.1:c.788-6T>A
Intron_number5/13
Y57G11A.1e.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY57G11A.1e.1:c.812-6T>A
Intron_number6/14
Y57G11A.1d.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY57G11A.1d.1:c.788-6T>A
Intron_number5/13
Y57G11A.1b.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY57G11A.1b.1:c.788-6T>A
Intron_number6/14
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw62526
MethodWGS_Hawaiian_Waterston