WormBase Tree Display for Variation: WBVar00195829
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WBVar00195829 | Name | Public_name | WBVar00195829 | ||
---|---|---|---|---|---|
Other_name | haw63105 | ||||
Y57G11C.42c.1:c.467+2021T>A | |||||
Y57G11C.42a.1:c.1229+336T>A | |||||
Y57G11C.42b.2:c.902+2021T>A | |||||
Y57G11C.42b.1:c.902+2021T>A | |||||
Y57G11C.42d.1:c.794+336T>A | |||||
Y57G11C.42a.2:c.1229+336T>A | |||||
HGVSg | CHROMOSOME_IV:g.14738944T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y57G11C | |
Flanking_sequences | gaatttttgaaaaacaaacaaatgt | tgttgattcattagatctttaaaaa | |||
Mapping_target | Y57G11C | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00013331 | |||
Transcript | Y57G11C.42c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42c.1:c.467+2021T>A | ||||
Intron_number | 4/9 | ||||
Y57G11C.42a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42a.1:c.1229+336T>A | ||||
Intron_number | 8/13 | ||||
Y57G11C.42b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42b.1:c.902+2021T>A | ||||
Intron_number | 6/11 | ||||
Y57G11C.42b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42b.2:c.902+2021T>A | ||||
Intron_number | 7/12 | ||||
Y57G11C.42a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42a.2:c.1229+336T>A | ||||
Intron_number | 7/12 | ||||
Y57G11C.42d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.42d.1:c.794+336T>A | ||||
Intron_number | 4/9 | ||||
Remark | [20081124 db] this Variation was previously named hw63105 | ||||
Method | WGS_Hawaiian_Waterston |