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WormBase Tree Display for Variation: WBVar00195913

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Name Class

WBVar00195913EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00195913
Other_namehaw63189
haw156813
cewivar00213525
Y57G11C.45b.1:c.*25C>T
Y57G11C.45a.1:c.*41C>T
Y57G11C.45b.2:c.*25C>T
HGVSgCHROMOSOME_IV:g.14783471G>A
Sequence_detailsSMapS_parentSequenceY57G11C
Flanking_sequencesctgcagaaacaaggagggaactgatattgagaatagtaagtcgtcaccat
Mapping_targetY57G11C
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00576678
StatusLive
AffectsGeneWBGene00013334
TranscriptY57G11C.45b.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY57G11C.45b.2:c.*25C>T
cDNA_position488
Exon_number6/6
Y57G11C.45b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY57G11C.45b.1:c.*25C>T
cDNA_position372
Exon_number6/6
Y57G11C.45a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY57G11C.45a.1:c.*41C>T
cDNA_position391
Exon_number6/6
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw63189
MethodWGS_Hawaiian_Waterston