WormBase Tree Display for Variation: WBVar00196242
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WBVar00196242 | Name | Public_name | WBVar00196242 | ||
---|---|---|---|---|---|
Other_name | haw63518 | ||||
Y41E3.3a.1:c.190-1180T>A | |||||
Y41E3.3c.1:c.190-1180T>A | |||||
HGVSg | CHROMOSOME_IV:g.14988335T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
Flanking_sequences | attttgtataagagaatatttcatt | tgaggttttctgaaacaaaaaaaag | |||
Mapping_target | Y41E3 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00012763 | |||
Transcript | Y41E3.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3c.1:c.190-1180T>A | ||||
Intron_number | 3/10 | ||||
Y41E3.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3a.1:c.190-1180T>A | ||||
Intron_number | 3/11 | ||||
Remark | [20081124 db] this Variation was previously named hw63518 | ||||
Method | WGS_Hawaiian_Waterston |