WormBase Tree Display for Variation: WBVar00196334
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WBVar00196334 | Name | Public_name | WBVar00196334 | ||
---|---|---|---|---|---|
Other_name | haw63610 | ||||
cewivar00214056 | |||||
Y41E3.9b.1:c.2359-372T>C | |||||
Y41E3.9c.1:c.1288-372T>C | |||||
Y41E3.9a.1:c.4123-372T>C | |||||
HGVSg | CHROMOSOME_IV:g.15036369T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
Flanking_sequences | cctttagaaaaaggaagaaataatc | ttttttgcccaaaacaaatccaaaa | |||
Mapping_target | Y41E3 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012767 | |||
Transcript | Y41E3.9c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.9c.1:c.1288-372T>C | ||||
Intron_number | 3/3 | ||||
Y41E3.9a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.9a.1:c.4123-372T>C | ||||
Intron_number | 10/11 | ||||
Y41E3.9b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.9b.1:c.2359-372T>C | ||||
Intron_number | 5/5 | ||||
Remark | [20081124 db] this Variation was previously named hw63610 | ||||
Method | WGS_Hawaiian_Waterston |