WormBase Tree Display for Variation: WBVar00196362
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WBVar00196362 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00196362 | |||
Other_name | snp_Y41E3[15] | ||||
haw63638 | |||||
cewivar00214107 | |||||
Y41E3.19.1:c.381T>C | |||||
CE40432:p.Cys127= | |||||
HGVSg | CHROMOSOME_IV:g.15056931T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
Flanking_sequences | tcacttcaaaatgcgatggtccttg | caaagagagttcccatcaaatttgc | |||
Mapping_target | Y41E3 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00247167 | |||
Status | Live | ||||
Affects | Gene | WBGene00044979 | |||
Transcript | Y41E3.19.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y41E3.19.1:c.381T>C | ||||
HGVSp | CE40432:p.Cys127= | ||||
cDNA_position | 451 | ||||
CDS_position | 381 | ||||
Protein_position | 127 | ||||
Exon_number | 5/10 | ||||
Codon_change | tgT/tgC | ||||
Amino_acid_change | C | ||||
Reference | WBPaper00004703 | ||||
Remark | [20081124 db] this Variation was previously named hw63638 | ||||
Method | WGS_Hawaiian_Waterston |