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WormBase Tree Display for Variation: WBVar00197259

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Name Class

WBVar00197259NamePublic_nameWBVar00197259
Other_namehaw64535
cewivar00215182
Y73F8A.25e.1:c.649-2498T>A
Y73F8A.25d.1:c.1831-2498T>A
Y73F8A.25a.2:c.*80T>A
Y73F8A.25a.1:c.*80T>A
HGVSgCHROMOSOME_IV:g.15458019A>T
Sequence_detailsSMapS_parentSequenceY73F8A
Flanking_sequencesttccacaaaacttacacatttaattaaaaaaaaaaccgattgattttctt
Mapping_targetY73F8A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013530
TranscriptY73F8A.25a.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.2:c.*80T>A
cDNA_position2016
Exon_number11/11
Y73F8A.25a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.1:c.*80T>A
cDNA_position2009
Exon_number11/12
Y73F8A.25e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25e.1:c.649-2498T>A
Intron_number3/3
Y73F8A.25d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25d.1:c.1831-2498T>A
Intron_number9/10
Remark[20081124 db] this Variation was previously named hw64535
MethodWGS_Hawaiian_Waterston