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WormBase Tree Display for Variation: WBVar00197276

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Name Class

WBVar00197276NamePublic_nameWBVar00197276
Other_namehaw64552
Y73F8A.25b.1:c.410+952A>C
Y73F8A.25a.2:c.1361+952A>C
Y73F8A.25d.1:c.1361+952A>C
Y73F8A.25e.1:c.179+952A>C
Y73F8A.25a.1:c.1361+952A>C
HGVSgCHROMOSOME_IV:g.15464965T>G
Sequence_detailsSMapS_parentSequenceY73F8A
Flanking_sequencesctaaaagtggaaaaaaaaaccagttttaagtttatttttaatgttttttc
Mapping_targetY73F8A
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00013530
WBGene00305889
TranscriptY73F8A.25b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25b.1:c.410+952A>C
Intron_number4/6
Y73F8A.25a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.2:c.1361+952A>C
Intron_number7/10
Y73F8A.1177
Y73F8A.25a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.1:c.1361+952A>C
Intron_number7/11
Y73F8A.25e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25e.1:c.179+952A>C
Intron_number1/3
Y73F8A.25d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25d.1:c.1361+952A>C
Intron_number7/10
Remark[20081124 db] this Variation was previously named hw64552
MethodWGS_Hawaiian_Waterston