WormBase Tree Display for Variation: WBVar00197295
expand all nodes | collapse all nodes | view schema
WBVar00197295 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00197295 | |||
Other_name | haw64571 | ||||
haw157598 | |||||
cewivar00215219 | |||||
Y73F8A.25d.1:c.678-351G>C | |||||
Y73F8A.25a.2:c.678-351G>C | |||||
Y73F8A.25a.1:c.678-351G>C | |||||
HGVSg | CHROMOSOME_IV:g.15470231C>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y73F8A | |
Flanking_sequences | ctggaaaatgtggggatttttcgag | aaaattgaggatttgcgatgatttt | |||
Mapping_target | Y73F8A | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00577463 | |||
Status | Live | ||||
Affects | Gene | WBGene00013530 | |||
Transcript | Y73F8A.25a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25a.2:c.678-351G>C | ||||
Intron_number | 3/10 | ||||
Y73F8A.25a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25a.1:c.678-351G>C | ||||
Intron_number | 3/11 | ||||
Y73F8A.25d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25d.1:c.678-351G>C | ||||
Intron_number | 3/10 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw64571 | ||||
Method | WGS_Hawaiian_Waterston |