WormBase Tree Display for Variation: WBVar00197397
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WBVar00197397 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00197397 | |||
Other_name | haw64673 | ||||
haw157658 | |||||
cewivar00215346 | |||||
Y73F8A.33:n.2887T>A | |||||
Y73F8A.32a.1:c.-595A>T | |||||
HGVSg | CHROMOSOME_IV:g.15520929T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y73F8A | |
Flanking_sequences | ttcgactcgtttcatcccgagctgg | tgattgatatcctgaaaataacagc | |||
Mapping_target | Y73F8A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00577523 | |||
Status | Live | ||||
Affects | Gene | WBGene00013537 | |||
WBGene00013536 | |||||
Transcript | Y73F8A.32a.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.32a.1:c.-595A>T | ||||
cDNA_position | 228 | ||||
Exon_number | 2/10 | ||||
Pseudogene | Y73F8A.33 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.33:n.2887T>A | ||||
cDNA_position | 2887 | ||||
Exon_number | 14/14 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw64673 | ||||
Method | WGS_Hawaiian_Waterston |