WormBase Tree Display for Variation: WBVar00197988

WBVar00197988 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00197988
    Other_name: snp_Y105C5B[11]
      haw65264
      cewivar00216087
      Y105C5B.6a.1:c.227-604T>A
      Y105C5B.6c.1:c.227-604T>A
    HGVSg: CHROMOSOME_IV:g.15907521T>A
  Sequence_details: SMap: S_parent: Sequence: Y105C5B
    Flanking_sequences: tctttctttttttcaagcttttttt taaattcctcgatgtccatgaataa
    Mapping_target: Y105C5B
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023665 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00248253
    Status: Live
  Affects: Gene: WBGene00005726
    Transcript: Y105C5B.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.6a.1:c.227-604T>A
        Intron_number: 1/7
      Y105C5B.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.6c.1:c.227-604T>A
        Intron_number: 1/7
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw65264
  Method: WGS_Hawaiian_Waterston