WormBase Tree Display for Variation: WBVar00200062

WBVar00200062 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00200062
    Other_name: haw67338
      haw159218
      cewivar00218558
      Y116A8C.25e.1:c.39+82A>T
      Y116A8C.25b.1:c.39+82A>T
      Y116A8C.25d.1:c.102+19A>T
      Y116A8C.25a.1:c.102+19A>T
    HGVSg: CHROMOSOME_IV:g.17078625T>A
  Sequence_details: SMap: S_parent: Sequence: Y116A8C
    Flanking_sequences: aaaaaaaaacatttgattttttttt aattttactaagaaataccccaaac
    Mapping_target: Y116A8C
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00579083
    Status: Live
  Affects: Gene: WBGene00013802
    Transcript: Y116A8C.25d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8C.25d.1:c.102+19A>T
        Intron_number: 1/7
      Y116A8C.25a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8C.25a.1:c.102+19A>T
        Intron_number: 2/8
      Y116A8C.25e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8C.25e.1:c.39+82A>T
        Intron_number: 1/6
      Y116A8C.25b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8C.25b.1:c.39+82A>T
        Intron_number: 2/8
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw67338
  Method: WGS_Hawaiian_Waterston