WormBase Tree Display for Variation: WBVar00201502
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| WBVar00201502 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00201502 | |||
| Other_name | haw68778 | ||||
| haw160185 | |||||
| cewivar00044705 | |||||
| CE50776:p.Asn138= | |||||
| F31F4.11b.1:c.414T>C | |||||
| CE44433:p.Asn138= | |||||
| F31F4.11a.1:c.414T>C | |||||
| HGVSg | CHROMOSOME_V:g.663565A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F31F4 | |
| Flanking_sequences | gttgacttctctttagattccacgg | ttttcataaacacagcatacttttt | |||
| Mapping_target | F31F4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00580050 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00017960 | |||
| Transcript | F31F4.11b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F31F4.11b.1:c.414T>C | ||||
| HGVSp | CE50776:p.Asn138= | ||||
| cDNA_position | 433 | ||||
| CDS_position | 414 | ||||
| Protein_position | 138 | ||||
| Exon_number | 4/11 | ||||
| Codon_change | aaT/aaC | ||||
| Amino_acid_change | N | ||||
| F31F4.11a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F31F4.11a.1:c.414T>C | ||||
| HGVSp | CE44433:p.Asn138= | ||||
| cDNA_position | 451 | ||||
| CDS_position | 414 | ||||
| Protein_position | 138 | ||||
| Exon_number | 4/11 | ||||
| Codon_change | aaT/aaC | ||||
| Amino_acid_change | N | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw68778 | ||||
| Method | WGS_Hawaiian_Waterston |
