WormBase Tree Display for Variation: WBVar00202197
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WBVar00202197 | Name | Public_name | WBVar00202197 | ||
---|---|---|---|---|---|
Other_name | haw69473 | ||||
Y50D4C.4a.1:c.2147+498C>A | |||||
Y50D4C.4c.1:c.107+498C>A | |||||
Y50D4C.4b.1:c.1013+498C>A | |||||
HGVSg | CHROMOSOME_V:g.952411G>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | |
Flanking_sequences | gaattacgaaattttcgtttttttt | tttttttccgattttttttgggctt | |||
Mapping_target | Y50D4C | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00005024 | |||
Transcript | Y50D4C.4b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.4b.1:c.1013+498C>A | ||||
Intron_number | 3/3 | ||||
Y50D4C.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.4c.1:c.107+498C>A | ||||
Intron_number | 1/1 | ||||
Y50D4C.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.4a.1:c.2147+498C>A | ||||
Intron_number | 7/8 | ||||
Remark | [20081124 db] this Variation was previously named hw69473 | ||||
Method | WGS_Hawaiian_Waterston |