WormBase Tree Display for Variation: WBVar00202297
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| WBVar00202297 | Name | Public_name | WBVar00202297 | ||
|---|---|---|---|---|---|
| Other_name | snp_R09A1[3] | ||||
| haw69573 | |||||
| haw160788 | |||||
| cewivar00046444 | |||||
| R09A1.1a.1:c.2045+173A>T | |||||
| R09A1.1b.1:c.824+173A>T | |||||
| HGVSg | CHROMOSOME_V:g.1013211A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | R09A1 | |
| Flanking_sequences | cccattttaaaaaattctgaaaaaa | ttgaatttccttcaaaaaatgttcc | |||
| Mapping_target | R09A1 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (14) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00245884 | |||
| WBVar00580653 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019971 | |||
| Transcript | R09A1.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R09A1.1b.1:c.824+173A>T | ||||
| Intron_number | 1/4 | ||||
| R09A1.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R09A1.1a.1:c.2045+173A>T | ||||
| Intron_number | 4/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| Remark | [20081124 db] this Variation was previously named hw69573 | ||||
| Method | WGS_Hawaiian_Waterston |
