WormBase Tree Display for Variation: WBVar00202771
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WBVar00202771 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00202771 | |||
Other_name | haw70047 | ||||
haw161170 | |||||
cewivar00221983 | |||||
Y75B7AL.4e.1:c.1914+97T>A | |||||
Y75B7AL.4d.1:c.1914+97T>A | |||||
Y75B7AL.4b.1:c.601-3893T>A | |||||
Y75B7AL.4g.1:c.1527+97T>A | |||||
Y75B7AL.4f.1:c.1527+97T>A | |||||
Y75B7AL.4c.1:c.2154+97T>A | |||||
Y75B7AL.4a.1:c.2154+97T>A | |||||
HGVSg | CHROMOSOME_V:g.1377739A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y75B7AL | |
Flanking_sequences | tccagcaatttgtcattttgccgga | attttcaatttcaacaatttgccga | |||
Mapping_target | Y75B7AL | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00581035 | |||
Status | Live | ||||
Affects | Gene | WBGene00022286 | |||
Transcript | Y75B7AL.4g.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4g.1:c.1527+97T>A | ||||
Intron_number | 3/6 | ||||
Y75B7AL.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4e.1:c.1914+97T>A | ||||
Intron_number | 4/7 | ||||
Y75B7AL.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4d.1:c.1914+97T>A | ||||
Intron_number | 4/7 | ||||
Y75B7AL.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4c.1:c.2154+97T>A | ||||
Intron_number | 6/10 | ||||
Y75B7AL.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4f.1:c.1527+97T>A | ||||
Intron_number | 3/6 | ||||
Y75B7AL.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4b.1:c.601-3893T>A | ||||
Intron_number | 2/2 | ||||
Y75B7AL.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y75B7AL.4a.1:c.2154+97T>A | ||||
Intron_number | 6/10 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw70047 | ||||
Method | WGS_Hawaiian_Waterston |