WormBase Tree Display for Variation: WBVar00203399
expand all nodes | collapse all nodes | view schema
WBVar00203399 | Name | Public_name | WBVar00203399 | ||
---|---|---|---|---|---|
Other_name | haw70675 | ||||
haw161632 | |||||
cewivar00222932 | |||||
Y46H3A.6c.1:c.408+23C>A | |||||
Y46H3A.6b.1:c.1095+23C>A | |||||
Y46H3A.6a.1:c.1224+23C>A | |||||
HGVSg | CHROMOSOME_V:g.1818351G>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y46H3A | |
Flanking_sequences | tttttgatttttttgtaggaaattt | aactctttctccacaaacttacaat | |||
Mapping_target | Y46H3A | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (65) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00581497 | |||
WBVar01458335 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001632 | |||
Transcript | Y46H3A.6c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y46H3A.6c.1:c.408+23C>A | ||||
Intron_number | 1/2 | ||||
Y46H3A.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y46H3A.6a.1:c.1224+23C>A | ||||
Intron_number | 5/7 | ||||
Y46H3A.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y46H3A.6b.1:c.1095+23C>A | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
Remark | [20081124 db] this Variation was previously named hw70675 | ||||
Method | WGS_Hawaiian_Waterston |