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WormBase Tree Display for Variation: WBVar00203775

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Name Class

WBVar00203775EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00203775
Other_namesnp_Y40B10A[1]
haw71051
cewivar00223473
Y40B10A.5b.1:c.841-27T>A
Y40B10A.5a.1:c.832-27T>A
Y40B10A.5d.1:c.841-27T>A
Y40B10A.5c.1:c.832-27T>A
HGVSgCHROMOSOME_V:g.2043564A>T
Sequence_detailsSMapS_parentSequenceY40B10A
Flanking_sequencestgtaataatatttttctgtttgaaattttttttaaatatcctggtcgatc
Mapping_targetY40B10A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00247102
StatusLive
AffectsGeneWBGene00021490
TranscriptY40B10A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B10A.5c.1:c.832-27T>A
Intron_number6/7
Y40B10A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B10A.5a.1:c.832-27T>A
Intron_number7/9
Y40B10A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B10A.5b.1:c.841-27T>A
Intron_number6/7
Y40B10A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40B10A.5d.1:c.841-27T>A
Intron_number6/8
ReferenceWBPaper00004703
Remark[20081124 db] this Variation was previously named hw71051
MethodWGS_Hawaiian_Waterston