WormBase Tree Display for Variation: WBVar00203775
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WBVar00203775 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00203775 | |||
Other_name | snp_Y40B10A[1] | ||||
haw71051 | |||||
cewivar00223473 | |||||
Y40B10A.5b.1:c.841-27T>A | |||||
Y40B10A.5a.1:c.832-27T>A | |||||
Y40B10A.5d.1:c.841-27T>A | |||||
Y40B10A.5c.1:c.832-27T>A | |||||
HGVSg | CHROMOSOME_V:g.2043564A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y40B10A | |
Flanking_sequences | tgtaataatatttttctgtttgaaa | ttttttttaaatatcctggtcgatc | |||
Mapping_target | Y40B10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00247102 | |||
Status | Live | ||||
Affects | Gene | WBGene00021490 | |||
Transcript | Y40B10A.5c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.5c.1:c.832-27T>A | ||||
Intron_number | 6/7 | ||||
Y40B10A.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.5a.1:c.832-27T>A | ||||
Intron_number | 7/9 | ||||
Y40B10A.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.5b.1:c.841-27T>A | ||||
Intron_number | 6/7 | ||||
Y40B10A.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.5d.1:c.841-27T>A | ||||
Intron_number | 6/8 | ||||
Reference | WBPaper00004703 | ||||
Remark | [20081124 db] this Variation was previously named hw71051 | ||||
Method | WGS_Hawaiian_Waterston |