WormBase Tree Display for Variation: WBVar00203964
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WBVar00203964 | Name | Public_name | WBVar00203964 | ||
---|---|---|---|---|---|
Other_name | haw71240 | ||||
cewivar00223798 | |||||
F22F7.7c.1:c.168-33T>A | |||||
F22F7.7a.2:c.591-33T>A | |||||
F22F7.7a.1:c.591-33T>A | |||||
F22F7.7b.1:c.480-33T>A | |||||
HGVSg | CHROMOSOME_V:g.2132231A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F22F7 | |
Flanking_sequences | atagaaatttataaattaaaaaaaa | atattagaagcttttttcgaataaa | |||
Mapping_target | F22F7 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00017724 | |||
Transcript | F22F7.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F22F7.7b.1:c.480-33T>A | ||||
Intron_number | 3/3 | ||||
F22F7.7a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22F7.7a.2:c.591-33T>A | ||||
Intron_number | 5/6 | ||||
F22F7.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22F7.7a.1:c.591-33T>A | ||||
Intron_number | 6/7 | ||||
F22F7.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22F7.7c.1:c.168-33T>A | ||||
Intron_number | 1/1 | ||||
Remark | [20081124 db] this Variation was previously named hw71240 | ||||
Method | WGS_Hawaiian_Waterston |