WormBase Tree Display for Variation: WBVar00204647
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| WBVar00204647 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00204647 | |||
| Other_name | haw71923 | ||||
| haw162570 | |||||
| cewivar00225268 | |||||
| CE51111:p.Pro22Ser | |||||
| W02G9.5c.1:c.64C>T | |||||
| CE51081:p.Pro161Ser | |||||
| W02G9.5b.1:c.481C>T | |||||
| CE51063:p.Pro227Ser | |||||
| W02G9.5a.1:c.679C>T | |||||
| HGVSg | CHROMOSOME_V:g.2658802C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W02G9 | |
| Flanking_sequences | gtcaaacggtgcttcttcttcttca | catcctccacggggactacacaaca | |||
| Mapping_target | W02G9 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (11) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00582435 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00020955 | |||
| Transcript | W02G9.5a.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | W02G9.5a.1:c.679C>T | ||||
| HGVSp | CE51063:p.Pro227Ser | ||||
| cDNA_position | 679 | ||||
| CDS_position | 679 | ||||
| Protein_position | 227 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| W02G9.5c.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | W02G9.5c.1:c.64C>T | ||||
| HGVSp | CE51111:p.Pro22Ser | ||||
| cDNA_position | 64 | ||||
| CDS_position | 64 | ||||
| Protein_position | 22 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| W02G9.5b.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | W02G9.5b.1:c.481C>T | ||||
| HGVSp | CE51081:p.Pro161Ser | ||||
| cDNA_position | 481 | ||||
| CDS_position | 481 | ||||
| Protein_position | 161 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw71923 | ||||
| Method | WGS_Hawaiian_Waterston |
