WormBase Tree Display for Variation: WBVar00204711
expand all nodes | collapse all nodes | view schema
WBVar00204711 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00204711 | |||
Other_name | haw71987 | ||||
haw162633 | |||||
cewivar00225436 | |||||
Y45G12B.2a.1:c.807+288A>G | |||||
Y45G12B.2b.1:c.336+288A>G | |||||
Y45G12B.2c.1:c.276+288A>G | |||||
HGVSg | CHROMOSOME_V:g.2697741A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y45G12B | |
Flanking_sequences | ctgcggcgcgatgtttcgcaactcc | ccgcgcgactattttttacaagttt | |||
Mapping_target | Y45G12B | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00582498 | |||
Status | Live | ||||
Affects | Gene | WBGene00021563 | |||
Transcript | Y45G12B.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y45G12B.2c.1:c.276+288A>G | ||||
Intron_number | 1/1 | ||||
Y45G12B.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y45G12B.2b.1:c.336+288A>G | ||||
Intron_number | 2/2 | ||||
Y45G12B.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y45G12B.2a.1:c.807+288A>G | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw71987 | ||||
Method | WGS_Hawaiian_Waterston |