WormBase Tree Display for Variation: WBVar00204880
expand all nodes | collapse all nodes | view schema
WBVar00204880 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00204880 | |||
Other_name | haw72156 | ||||
haw162767 | |||||
cewivar00225745 | |||||
C24B9.16.1:c.180C>T | |||||
CE51102:p.Phe60= | |||||
HGVSg | CHROMOSOME_V:g.2749196G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C24B9 | |
Flanking_sequences | aactattaaacgaacgctaattgcattggaaacag | aaaaatagtccaagaccgcacatca | |||
Mapping_target | C24B9 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00582632 | |||
Status | Live | ||||
Affects | Gene | WBGene00005915 | |||
Transcript | C24B9.16.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C24B9.16.1:c.180C>T | ||||
HGVSp | CE51102:p.Phe60= | ||||
cDNA_position | 180 | ||||
CDS_position | 180 | ||||
Protein_position | 60 | ||||
Exon_number | 2/6 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw72156 | ||||
Method | WGS_Hawaiian_Waterston |