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WormBase Tree Display for Variation: WBVar00204974

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Name Class

WBVar00204974EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00204974
Other_namehaw72250
haw162863
cewivar00225907
F54E2.3g.1:c.1240-593G>C
F54E2.3f.1:c.1240-593G>C
F54E2.3e.1:c.1240-593G>C
F54E2.3h.1:c.1240-593G>C
HGVSgCHROMOSOME_V:g.2801584C>G
Sequence_detailsSMapS_parentSequenceF54E2
Flanking_sequencesttaattttgaaatcatttttttttcagaactgttgaaaactaaaattttt
Mapping_targetF54E2
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00582728
StatusLive
AffectsGeneWBGene00004130
TranscriptF54E2.3h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54E2.3h.1:c.1240-593G>C
Intron_number6/27
F54E2.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54E2.3f.1:c.1240-593G>C
Intron_number6/25
F54E2.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54E2.3e.1:c.1240-593G>C
Intron_number6/27
F54E2.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54E2.3g.1:c.1240-593G>C
Intron_number6/28
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw72250
MethodWGS_Hawaiian_Waterston