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WormBase Tree Display for Variation: WBVar00206776

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Name Class

WBVar00206776EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00206776
Other_namehaw74052
haw164222
cewivar00229458
W08A12.1b.3:c.142-2138C>T
W08A12.1b.1:c.142-2138C>T
W08A12.1a.1:c.48-657C>T
W08A12.1c.1:c.124-2138C>T
W08A12.1b.2:c.142-2138C>T
W08A12.1e.1:c.67-2138C>T
HGVSgCHROMOSOME_V:g.3695314C>T
Sequence_detailsSMapS_parentSequenceW08A12
Flanking_sequencescaaaactgagcgatttttgaattttaacaaatattcgactcaagatcact
Mapping_targetW08A12
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00584087
StatusLive
AffectsGeneWBGene00021078
TranscriptW08A12.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.3:c.142-2138C>T
Intron_number3/7
W08A12.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1a.1:c.48-657C>T
Intron_number2/7
W08A12.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1c.1:c.124-2138C>T
Intron_number3/7
W08A12.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.2:c.142-2138C>T
Intron_number4/8
W08A12.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.1:c.142-2138C>T
Intron_number4/8
W08A12.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1e.1:c.67-2138C>T
Intron_number1/4
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw74052
MethodWGS_Hawaiian_Waterston