WormBase Tree Display for Variation: WBVar00206776
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WBVar00206776 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00206776 | |||
Other_name | haw74052 | ||||
haw164222 | |||||
cewivar00229458 | |||||
W08A12.1b.3:c.142-2138C>T | |||||
W08A12.1b.1:c.142-2138C>T | |||||
W08A12.1a.1:c.48-657C>T | |||||
W08A12.1c.1:c.124-2138C>T | |||||
W08A12.1b.2:c.142-2138C>T | |||||
W08A12.1e.1:c.67-2138C>T | |||||
HGVSg | CHROMOSOME_V:g.3695314C>T | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | caaaactgagcgatttttgaatttt | aacaaatattcgactcaagatcact | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00584087 | |||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.142-2138C>T | ||||
Intron_number | 3/7 | ||||
W08A12.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.48-657C>T | ||||
Intron_number | 2/7 | ||||
W08A12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.124-2138C>T | ||||
Intron_number | 3/7 | ||||
W08A12.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.142-2138C>T | ||||
Intron_number | 4/8 | ||||
W08A12.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.142-2138C>T | ||||
Intron_number | 4/8 | ||||
W08A12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1e.1:c.67-2138C>T | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw74052 | ||||
Method | WGS_Hawaiian_Waterston |