WormBase Tree Display for Variation: WBVar00206793
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WBVar00206793 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00206793 | |||
Other_name | haw74069 | ||||
haw164236 | |||||
cewivar00046991 | |||||
W08A12.1c.1:c.1212+541T>A | |||||
W08A12.1d.1:c.1353+541T>A | |||||
W08A12.1b.2:c.1230+541T>A | |||||
W08A12.1a.1:c.1401+541T>A | |||||
W08A12.1e.1:c.1155+541T>A | |||||
W08A12.1b.1:c.1230+541T>A | |||||
W08A12.1b.3:c.1230+541T>A | |||||
HGVSg | CHROMOSOME_V:g.3700545T>A | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | taaaaaataagtttcaaaaaacttt | aaaaaaaccgctttttgaagaaata | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00584101 | |||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.1230+541T>A | ||||
Intron_number | 6/7 | ||||
W08A12.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.1401+541T>A | ||||
Intron_number | 6/7 | ||||
W08A12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.1212+541T>A | ||||
Intron_number | 6/7 | ||||
W08A12.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.1230+541T>A | ||||
Intron_number | 7/8 | ||||
W08A12.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.1230+541T>A | ||||
Intron_number | 7/8 | ||||
W08A12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1d.1:c.1353+541T>A | ||||
Intron_number | 4/5 | ||||
W08A12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1e.1:c.1155+541T>A | ||||
Intron_number | 4/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw74069 | ||||
Method | WGS_Hawaiian_Waterston |