WormBase Tree Display for Variation: WBVar00206798
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WBVar00206798 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00206798 | |||
Other_name | haw74074 | ||||
haw164241 | |||||
cewivar00229484 | |||||
W08A12.1a.1:c.*100T>A | |||||
W08A12.1d.1:c.*100T>A | |||||
W08A12.1c.1:c.*100T>A | |||||
W08A12.1b.1:c.*100T>A | |||||
W08A12.1b.3:c.*100T>A | |||||
W08A12.1b.2:c.*100T>A | |||||
HGVSg | CHROMOSOME_V:g.3701441T>A | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | tgtagaaaactcttaaattttttgc | gattttctcgattttttttctaaat | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00584106 | |||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.*100T>A | ||||
cDNA_position | 1467 | ||||
Exon_number | 8/8 | ||||
W08A12.1a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.*100T>A | ||||
cDNA_position | 1651 | ||||
Exon_number | 8/8 | ||||
W08A12.1c.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.*100T>A | ||||
cDNA_position | 1651 | ||||
Exon_number | 8/8 | ||||
W08A12.1b.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.*100T>A | ||||
cDNA_position | 1560 | ||||
Exon_number | 9/9 | ||||
W08A12.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.*100T>A | ||||
cDNA_position | 1533 | ||||
Exon_number | 9/9 | ||||
W08A12.1d.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1d.1:c.*100T>A | ||||
cDNA_position | 1558 | ||||
Exon_number | 6/6 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw74074 | ||||
Method | WGS_Hawaiian_Waterston |