WormBase Tree Display for Variation: WBVar00206802
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| WBVar00206802 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00206802 | |||
| Other_name | haw74078 | ||||
| haw164242 | |||||
| cewivar00229487 | |||||
| W08A12.1c.1:c.*467T>C | |||||
| W08A12.1b.2:c.*467T>C | |||||
| W08A12.1d.1:c.*467T>C | |||||
| W08A12.1b.1:c.*467T>C | |||||
| W08A12.1b.3:c.*467T>C | |||||
| HGVSg | CHROMOSOME_V:g.3701808T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | W08A12 | |
| Flanking_sequences | aaaacaatttttcgcgttttttttg | aattcaggtgaacgtttttgtcaat | |||
| Mapping_target | W08A12 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00584107 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00021078 | |||
| Transcript | W08A12.1b.3 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W08A12.1b.3:c.*467T>C | ||||
| cDNA_position | 1834 | ||||
| Exon_number | 8/8 | ||||
| W08A12.1c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W08A12.1c.1:c.*467T>C | ||||
| cDNA_position | 2018 | ||||
| Exon_number | 8/8 | ||||
| W08A12.1b.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W08A12.1b.2:c.*467T>C | ||||
| cDNA_position | 1927 | ||||
| Exon_number | 9/9 | ||||
| W08A12.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W08A12.1b.1:c.*467T>C | ||||
| cDNA_position | 1900 | ||||
| Exon_number | 9/9 | ||||
| W08A12.1d.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W08A12.1d.1:c.*467T>C | ||||
| cDNA_position | 1925 | ||||
| Exon_number | 6/6 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw74078 | ||||
| Method | WGS_Hawaiian_Waterston |
