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WormBase Tree Display for Variation: WBVar00206818

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Name Class

WBVar00206818EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00206818
Other_namehaw74094
haw164258
cewivar00229528
T27C4.4e.1:c.2122-21T>C
T27C4.4b.2:c.2527-21T>C
T27C4.4d.1:c.2527-21T>C
T27C4.4a.1:c.2527-21T>C
T27C4.4b.1:c.2527-21T>C
HGVSgCHROMOSOME_V:g.3710017T>C
Sequence_detailsSMapS_parentSequenceT27C4
Flanking_sequencesttgcgcaagttcaaattctcacccgcaagtttcaaaaattttcaggctct
Mapping_targetT27C4
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00584123
StatusLive
AffectsGeneWBGene00003025
TranscriptT27C4.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27C4.4d.1:c.2527-21T>C
Intron_number6/8
T27C4.4b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27C4.4b.2:c.2527-21T>C
Intron_number6/8
T27C4.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27C4.4a.1:c.2527-21T>C
Intron_number6/9
T27C4.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27C4.4e.1:c.2122-21T>C
Intron_number3/4
T27C4.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27C4.4b.1:c.2527-21T>C
Intron_number6/8
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw74094
MethodWGS_Hawaiian_Waterston