WormBase Tree Display for Variation: WBVar00206821

WBVar00206821 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00206821
    Other_name: snp_T27C4[1]
      haw74097
      cewivar00229538
      T27C4.4d.1:c.*885-51A>T
      T27C4.4b.2:c.2608-51A>T
      T27C4.4e.1:c.2203-51A>T
      T27C4.4b.1:c.2608-51A>T
      T27C4.4a.1:c.2919-51A>T
    HGVSg: CHROMOSOME_V:g.3712302A>T
  Sequence_details: SMap: S_parent: Sequence: T27C4
    Flanking_sequences: caaacagccaagtaaaaaatttttt aaaagaaattctgatttcagataaa
    Mapping_target: T27C4
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00246490
    Status: Live
  Affects: Gene: WBGene00003025
    Transcript: T27C4.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4d.1:c.*885-51A>T
        Intron_number: 8/8
      T27C4.4b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.2:c.2608-51A>T
        Intron_number: 7/8
      T27C4.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4a.1:c.2919-51A>T
        Intron_number: 8/9
      T27C4.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4e.1:c.2203-51A>T
        Intron_number: 4/4
      T27C4.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.1:c.2608-51A>T
        Intron_number: 7/8
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw74097
  Method: WGS_Hawaiian_Waterston