WormBase Tree Display for Variation: WBVar00206839
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| WBVar00206839 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00206839 | |||
| Other_name | snp_T27C4[5] | ||||
| haw74115 | |||||
| cewivar00229564 | |||||
| T27C4.3.1:c.408C>T | |||||
| CE18297:p.Ser136= | |||||
| HGVSg | CHROMOSOME_V:g.3725479C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T27C4 | |
| Flanking_sequences | gatggaaaatcatttttctcatcag | tggcctttattttttggaatagctg | |||
| Mapping_target | T27C4 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00246494 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006096 | |||
| Transcript | T27C4.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.3.1:c.408C>T | ||||
| HGVSp | CE18297:p.Ser136= | ||||
| cDNA_position | 408 | ||||
| CDS_position | 408 | ||||
| Protein_position | 136 | ||||
| Exon_number | 1/4 | ||||
| Codon_change | agC/agT | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00004703 | ||||
| Remark | [20081124 db] this Variation was previously named hw74115 | ||||
| Method | WGS_Hawaiian_Waterston |
