WormBase Tree Display for Variation: WBVar00207129
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WBVar00207129 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00207129 | |||
Other_name | haw74405 | ||||
haw164553 | |||||
cewivar00230146 | |||||
H10D18.5a.1:c.51+3749T>C | |||||
H10D18.5b.1:c.-6T>C | |||||
HGVSg | CHROMOSOME_V:g.3827860A>G | ||||
Sequence_details | SMap | S_parent | Sequence | H10D18 | |
Flanking_sequences | attcgtcgtagaacatccattgtgt | tgtgtggttttacgagaagttattc | |||
Mapping_target | H10D18 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00584418 | |||
Status | Live | ||||
Affects | Gene | WBGene00019180 | |||
Transcript | H10D18.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H10D18.5a.1:c.51+3749T>C | ||||
Intron_number | 2/8 | ||||
H10D18.5b.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H10D18.5b.1:c.-6T>C | ||||
cDNA_position | 37 | ||||
Exon_number | 1/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw74405 | ||||
Method | WGS_Hawaiian_Waterston |