WormBase Tree Display for Variation: WBVar00208352
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| WBVar00208352 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00208352 | |||
| Other_name | haw75628 | ||||
| haw165465 | |||||
| cewivar00232340 | |||||
| CE52004:p.Gly75= | |||||
| Y61A9LA.3c.1:c.225G>A | |||||
| Y61A9LA.3a.1:c.225G>A | |||||
| CE27412:p.Gly75= | |||||
| HGVSg | CHROMOSOME_V:g.4571894G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y61A9LA | |
| Flanking_sequences | cgagaagacgtggtttcgataaggg | ccgtttggagaggatttgacgacga | |||
| Mapping_target | Y61A9LA | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00585330 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00022015 | |||
| WBGene00305853 | |||||
| Transcript | Y61A9LA.14 | ||||
| Y61A9LA.3c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y61A9LA.3c.1:c.225G>A | ||||
| HGVSp | CE52004:p.Gly75= | ||||
| cDNA_position | 233 | ||||
| CDS_position | 225 | ||||
| Protein_position | 75 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | ggG/ggA | ||||
| Amino_acid_change | G | ||||
| Y61A9LA.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y61A9LA.3a.1:c.225G>A | ||||
| HGVSp | CE27412:p.Gly75= | ||||
| cDNA_position | 235 | ||||
| CDS_position | 225 | ||||
| Protein_position | 75 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | ggG/ggA | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw75628 | ||||
| Method | WGS_Hawaiian_Waterston |
