WormBase Tree Display for Variation: WBVar00209089
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| WBVar00209089 | Name | Public_name | WBVar00209089 | ||
|---|---|---|---|---|---|
| Other_name | haw76365 | ||||
| cewivar00233337 | |||||
| Y49G5B.1b.1:c.-10+333A>T | |||||
| Y49G5B.1a.2:c.-10+333A>T | |||||
| HGVSg | CHROMOSOME_V:g.5223821A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49G5B | |
| Flanking_sequences | ccgtaatttttttgaaatttttttt | aaatgaattttttgcattaaaaaaa | |||
| Mapping_target | Y49G5B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021732 | |||
| Transcript | Y49G5B.1a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49G5B.1a.2:c.-10+333A>T | ||||
| Intron_number | 1/7 | ||||
| Y49G5B.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49G5B.1b.1:c.-10+333A>T | ||||
| Intron_number | 1/7 | ||||
| Remark | [20081124 db] this Variation was previously named hw76365 | ||||
| Method | WGS_Hawaiian_Waterston |
