WormBase Tree Display for Variation: WBVar00209456
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| WBVar00209456 | Name | Public_name | WBVar00209456 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.5556668C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C18C4 | |
| Flanking_sequences | ttttcaaaggtatgttcggtcatta | ggtcaattttttaatatttaaaaca | |||
| Mapping_target | C18C4 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015968 | |||
| Transcript | C18C4.7e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7e.1:c.-5+565G>T | ||||
| Intron_number | 5/19 | ||||
| C18C4.7b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7b.2:c.392+565G>T | ||||
| Intron_number | 6/20 | ||||
| C18C4.7b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7b.1:c.392+565G>T | ||||
| Intron_number | 9/23 | ||||
| C18C4.7e.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7e.2:c.-5+565G>T | ||||
| Intron_number | 3/17 | ||||
| C18C4.7d.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7d.2:c.-5+565G>T | ||||
| Intron_number | 1/16 | ||||
| C18C4.7c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7c.1:c.314+565G>T | ||||
| Intron_number | 4/17 | ||||
| C18C4.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7a.1:c.902+565G>T | ||||
| Intron_number | 10/24 | ||||
| C18C4.7e.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7e.3:c.-5+565G>T | ||||
| Intron_number | 1/15 | ||||
| C18C4.7d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18C4.7d.1:c.-5+565G>T | ||||
| Intron_number | 3/18 | ||||
| Remark | [20081124 db] this Variation was previously named hw76732 | ||||
| Method | WGS_Hawaiian_Waterston |
