WormBase Tree Display for Variation: WBVar00209546
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WBVar00209546 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00209546 | |||
Other_name | haw76822 | ||||
haw166282 | |||||
cewivar00233912 | |||||
CE42417:p.Ala139= | |||||
T01C2.1.1:c.417T>G | |||||
HGVSg | CHROMOSOME_V:g.5629765A>C | ||||
Sequence_details | SMap | S_parent | Sequence | T01C2 | |
Flanking_sequences | cgatgcatacaagttctgtccgttt | gcatgaaaaaatgatagtattgaaa | |||
Mapping_target | T01C2 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00586147 | |||
Status | Live | ||||
Affects | Gene | WBGene00000071 | |||
Transcript | T01C2.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T01C2.1.1:c.417T>G | ||||
HGVSp | CE42417:p.Ala139= | ||||
cDNA_position | 431 | ||||
CDS_position | 417 | ||||
Protein_position | 139 | ||||
Exon_number | 5/21 | ||||
Codon_change | gcT/gcG | ||||
Amino_acid_change | A | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw76822 | ||||
Method | WGS_Hawaiian_Waterston |