WormBase Tree Display for Variation: WBVar00210105
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WBVar00210105 | Name | Public_name | WBVar00210105 | ||
---|---|---|---|---|---|
Other_name (19) | |||||
HGVSg | CHROMOSOME_V:g.6166114A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y38B5A | |
Flanking_sequences | tgtcttcttgttccttctgtttctt | gcggattcatcttcaataacctttt | |||
Mapping_target | Y38B5A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006436 | |||
Transcript | W06H8.8f.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | W06H8.8f.1:c.26055T>C | ||||
HGVSp | CE52428:p.Ala8685= | ||||
cDNA_position | 26055 | ||||
CDS_position | 26055 | ||||
Protein_position | 8685 | ||||
Exon_number | 28/60 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8b.1:c.24777T>C | ||||
HGVSp | CE52423:p.Ala8259= | ||||
cDNA_position | 24870 | ||||
CDS_position | 24777 | ||||
Protein_position | 8259 | ||||
Exon_number | 28/58 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8a.1:c.26055T>C | ||||
HGVSp | CE52437:p.Ala8685= | ||||
cDNA_position | 26148 | ||||
CDS_position | 26055 | ||||
Protein_position | 8685 | ||||
Exon_number | 29/61 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8i.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8i.1:c.24777T>C | ||||
HGVSp | CE52442:p.Ala8259= | ||||
cDNA_position | 24777 | ||||
CDS_position | 24777 | ||||
Protein_position | 8259 | ||||
Exon_number | 27/57 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8a.2:c.26055T>C | ||||
HGVSp | CE52437:p.Ala8685= | ||||
cDNA_position | 26148 | ||||
CDS_position | 26055 | ||||
Protein_position | 8685 | ||||
Exon_number | 29/60 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8h.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8h.1:c.26055T>C | ||||
HGVSp | CE52451:p.Ala8685= | ||||
cDNA_position | 26055 | ||||
CDS_position | 26055 | ||||
Protein_position | 8685 | ||||
Exon_number | 28/58 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8d.1:c.26055T>C | ||||
HGVSp | CE52449:p.Ala8685= | ||||
cDNA_position | 26055 | ||||
CDS_position | 26055 | ||||
Protein_position | 8685 | ||||
Exon_number | 28/58 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8e.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8e.1:c.24777T>C | ||||
HGVSp | CE52441:p.Ala8259= | ||||
cDNA_position | 24777 | ||||
CDS_position | 24777 | ||||
Protein_position | 8259 | ||||
Exon_number | 27/56 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
W06H8.8g.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | W06H8.8g.1:c.24777T>C | ||||
HGVSp | CE52417:p.Ala8259= | ||||
cDNA_position | 24777 | ||||
CDS_position | 24777 | ||||
Protein_position | 8259 | ||||
Exon_number | 27/58 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw77381 | ||||
Method | WGS_Hawaiian_Waterston |