WormBase Tree Display for Variation: WBVar00210210
expand all nodes | collapse all nodes | view schema
WBVar00210210 | Name | Public_name | WBVar00210210 | ||
---|---|---|---|---|---|
Other_name | haw77486 | ||||
cewivar00234751 | |||||
T28C12.4a.2:c.1086G>A | |||||
T28C12.4b.2:c.846G>A | |||||
CE14345:p.Leu282= | |||||
CE14343:p.Leu362= | |||||
T28C12.4b.1:c.846G>A | |||||
T28C12.4a.1:c.1086G>A | |||||
HGVSg | CHROMOSOME_V:g.6324913G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T28C12 | |
Flanking_sequences | acatcttcaattttttcaatggatt | cccacttcaaagtgagtaattgaaa | |||
Mapping_target | T28C12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020891 | |||
Transcript | T28C12.4a.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T28C12.4a.2:c.1086G>A | ||||
HGVSp | CE14343:p.Leu362= | ||||
cDNA_position | 1120 | ||||
CDS_position | 1086 | ||||
Protein_position | 362 | ||||
Exon_number | 7/12 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
T28C12.4b.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T28C12.4b.2:c.846G>A | ||||
HGVSp | CE14345:p.Leu282= | ||||
cDNA_position | 881 | ||||
CDS_position | 846 | ||||
Protein_position | 282 | ||||
Exon_number | 5/10 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
T28C12.4b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T28C12.4b.1:c.846G>A | ||||
HGVSp | CE14345:p.Leu282= | ||||
cDNA_position | 1033 | ||||
CDS_position | 846 | ||||
Protein_position | 282 | ||||
Exon_number | 6/11 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
T28C12.4a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T28C12.4a.1:c.1086G>A | ||||
HGVSp | CE14343:p.Leu362= | ||||
cDNA_position | 1163 | ||||
CDS_position | 1086 | ||||
Protein_position | 362 | ||||
Exon_number | 6/11 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw77486 | ||||
Method | WGS_Hawaiian_Waterston |