WormBase Tree Display for Variation: WBVar00210941
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| WBVar00210941 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00210941 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.6925937G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y57E12B | |
| Flanking_sequences | ttctaggtaattgatcccttgctgg | tctgtttcgaaaaaaaaagaaaacg | |||
| Mapping_target | Y57E12B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00587087 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006801 | |||
| Transcript | K11C4.5e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5e.1:c.61-1131C>T | ||||
| Intron_number | 1/49 | ||||
| K11C4.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5a.1:c.61-1131C>T | ||||
| Intron_number | 2/50 | ||||
| K11C4.5c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5c.1:c.61-1131C>T | ||||
| Intron_number | 1/48 | ||||
| K11C4.5g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5g.1:c.61-1131C>T | ||||
| Intron_number | 1/48 | ||||
| K11C4.5h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5h.1:c.61-1131C>T | ||||
| Intron_number | 1/45 | ||||
| K11C4.5b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5b.1:c.61-1131C>T | ||||
| Intron_number | 1/46 | ||||
| K11C4.5d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5d.1:c.61-1131C>T | ||||
| Intron_number | 1/46 | ||||
| K11C4.5f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5f.1:c.61-1131C>T | ||||
| Intron_number | 1/46 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw78217 | ||||
| Method | WGS_Hawaiian_Waterston |
