WormBase Tree Display for Variation: WBVar00211079
expand all nodes | collapse all nodes | view schema
WBVar00211079 | Name | Public_name | WBVar00211079 | ||
---|---|---|---|---|---|
Other_name | haw78355 | ||||
cewivar00235890 | |||||
VC5.4.1:c.*208C>T | |||||
VC5.3a.1:c.*96G>A | |||||
HGVSg | CHROMOSOME_V:g.7081550G>A | ||||
Sequence_details | SMap | S_parent | Sequence | VC5 | |
Flanking_sequences | gcaacaagaagattatgaaattcaa | aataatttcattaaaaaaataagtg | |||
Mapping_target | VC5 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007029 | |||
WBGene00003786 | |||||
Transcript | VC5.4.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | VC5.4.1:c.*208C>T | ||||
cDNA_position | 1594 | ||||
Exon_number | 7/7 | ||||
VC5.3a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | VC5.3a.1:c.*96G>A | ||||
cDNA_position | 4503 | ||||
Exon_number | 13/13 | ||||
Remark | [20081124 db] this Variation was previously named hw78355 | ||||
Method | WGS_Hawaiian_Waterston |