WormBase Tree Display for Variation: WBVar00212330
expand all nodes | collapse all nodes | view schema
WBVar00212330 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00212330 | |||
Other_name | haw79606 | ||||
haw168101 | |||||
cewivar00238103 | |||||
CE52193:p.Ala235= | |||||
C50E3.14.1:c.705T>A | |||||
HGVSg | CHROMOSOME_V:g.7615245T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C50E3 | |
Flanking_sequences | atcaatcaagttgccctacaactgc | acaggttgtgatttgacaaaggttt | |||
Mapping_target | C50E3 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00587966 | |||
Status | Live | ||||
Affects | Gene | WBGene00044549 | |||
Transcript | C50E3.14.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C50E3.14.1:c.705T>A | ||||
HGVSp | CE52193:p.Ala235= | ||||
cDNA_position | 705 | ||||
CDS_position | 705 | ||||
Protein_position | 235 | ||||
Exon_number | 5/7 | ||||
Codon_change | gcT/gcA | ||||
Amino_acid_change | A | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw79606 | ||||
Method | WGS_Hawaiian_Waterston |