WormBase Tree Display for Variation: WBVar00212396
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| WBVar00212396 | Name | Public_name | WBVar00212396 | ||
|---|---|---|---|---|---|
| Other_name | uCE5-1616 | ||||
| haw79672 | |||||
| haw168149 | |||||
| cewivar00238266 | |||||
| C50E3.13.1:c.798G>A | |||||
| CE08906:p.Glu266= | |||||
| HGVSg | CHROMOSOME_V:g.7622883C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C50E3 | |
| Flanking_sequences | catcgacatgatgttcatcttcatc | tcagaatcgtaatcttcttggttcg | |||
| Mapping_target | C50E3 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar00272265 | |||
| WBVar00588014 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016824 | |||
| Transcript | C50E3.13.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C50E3.13.1:c.798G>A | ||||
| HGVSp | CE08906:p.Glu266= | ||||
| cDNA_position | 898 | ||||
| CDS_position | 798 | ||||
| Protein_position | 266 | ||||
| Exon_number | 5/6 | ||||
| Codon_change | gaG/gaA | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00005369 | |||||
| Remark | [20081124 db] this Variation was previously named hw79672 | ||||
| Method | WGS_Hawaiian_Waterston |
