WormBase Tree Display for Variation: WBVar00213239
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WBVar00213239 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00213239 | |||
Other_name | haw80515 | ||||
haw168678 | |||||
cewivar00239831 | |||||
F26D11.11f.1:c.1593-160G>A | |||||
F26D11.11a.1:c.1614-160G>A | |||||
F26D11.11c.1:c.1614-160G>A | |||||
F26D11.11e.1:c.1593-160G>A | |||||
F26D11.11d.1:c.1614-160G>A | |||||
F26D11.11b.1:c.1593-160G>A | |||||
HGVSg | CHROMOSOME_V:g.7975224C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F26D11 | |
Flanking_sequences | agttttagctatcaattagatctag | ctacattgaggcttccacgtaggca | |||
Mapping_target | F26D11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00588543 | |||
Status | Live | ||||
Affects | Gene | WBGene00002632 | |||
Transcript | F26D11.11b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11b.1:c.1593-160G>A | ||||
Intron_number | 6/9 | ||||
F26D11.11f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11f.1:c.1593-160G>A | ||||
Intron_number | 6/8 | ||||
F26D11.11e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11e.1:c.1593-160G>A | ||||
Intron_number | 6/8 | ||||
F26D11.11c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11c.1:c.1614-160G>A | ||||
Intron_number | 6/9 | ||||
F26D11.11d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11d.1:c.1614-160G>A | ||||
Intron_number | 7/10 | ||||
F26D11.11a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26D11.11a.1:c.1614-160G>A | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw80515 | ||||
Method | WGS_Hawaiian_Waterston |