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WormBase Tree Display for Variation: WBVar00213867

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Name Class

WBVar00213867EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00213867
Other_namehaw81143
haw169094
cewivar00240568
F40F9.1b.3:c.*63-65T>G
F40F9.1a.1:c.885-65T>G
F40F9.1b.2:c.*374T>G
F40F9.1a.2:c.885-65T>G
F40F9.1b.1:c.*31-65T>G
HGVSgCHROMOSOME_V:g.9707468T>G
Sequence_detailsSMapS_parentSequenceF40F9
Flanking_sequencesATCGTATTTTTTCGATAATATGTGAATCATTTGGTTGATAAAAGCAACAATTTCAGTTTCTATGTTGTGAAAAGCTTTTTATCAACTTGTAAACCTAATT
Mapping_targetF40F9
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00588959
StatusLive
AffectsGeneWBGene00009580
TranscriptF40F9.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40F9.1a.1:c.885-65T>G
Intron_number7/8
F40F9.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40F9.1a.2:c.885-65T>G
Intron_number8/9
F40F9.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40F9.1b.3:c.*63-65T>G
Intron_number8/8
F40F9.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40F9.1b.1:c.*31-65T>G
Intron_number9/9
F40F9.1b.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF40F9.1b.2:c.*374T>G
cDNA_position1269
Exon_number9/9
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw81143
MethodWGS_Hawaiian_Waterston