WormBase Tree Display for Variation: WBVar00213867
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WBVar00213867 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00213867 | |||
Other_name | haw81143 | ||||
haw169094 | |||||
cewivar00240568 | |||||
F40F9.1b.3:c.*63-65T>G | |||||
F40F9.1a.1:c.885-65T>G | |||||
F40F9.1b.2:c.*374T>G | |||||
F40F9.1a.2:c.885-65T>G | |||||
F40F9.1b.1:c.*31-65T>G | |||||
HGVSg | CHROMOSOME_V:g.9707468T>G | ||||
Sequence_details | SMap | S_parent | Sequence | F40F9 | |
Flanking_sequences | ATCGTATTTTTTCGATAATATGTGAATCATTTGGTTGATAAAAGCAACAA | TTTCAGTTTCTATGTTGTGAAAAGCTTTTTATCAACTTGTAAACCTAATT | |||
Mapping_target | F40F9 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00588959 | |||
Status | Live | ||||
Affects | Gene | WBGene00009580 | |||
Transcript | F40F9.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F40F9.1a.1:c.885-65T>G | ||||
Intron_number | 7/8 | ||||
F40F9.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F40F9.1a.2:c.885-65T>G | ||||
Intron_number | 8/9 | ||||
F40F9.1b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F40F9.1b.3:c.*63-65T>G | ||||
Intron_number | 8/8 | ||||
F40F9.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F40F9.1b.1:c.*31-65T>G | ||||
Intron_number | 9/9 | ||||
F40F9.1b.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F40F9.1b.2:c.*374T>G | ||||
cDNA_position | 1269 | ||||
Exon_number | 9/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw81143 | ||||
Method | WGS_Hawaiian_Waterston |