WormBase Tree Display for Variation: WBVar00216992
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WBVar00216992 | Name | Public_name | WBVar00216992 | ||
---|---|---|---|---|---|
Other_name | pas28768 | ||||
cewivar00116138 | |||||
F54B11.3a.1:c.197+63A>G | |||||
F54B11.3b.1:c.197+63A>G | |||||
HGVSg | CHROMOSOME_X:g.13585039A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54B11 | |
Flanking_sequences | tatctttaatatcttccttaaaattgtgttttgcaggtactatggctcccgcaacggaagccgacaacaacttcgacacccatgaatggaaatcggaattcgcatccacacgctctggacgcaattctccaaacatttttgcaaaagttcgccggaagcttctcctgactccaccagttcgaaacgccagatcgccacgtcttaccgaagaagagctggatgctttgacaggcgacttgtatgttacccccctccccctttttctcattcaaatttcgcgccacatacggccgaggtttc | cgcgcacctgctaggccacgttttgtttgtgtattttggaactcagtttgcttgtacttgacgccctagaagcctttgacaaatatgtaaaagctgtgttgttctgagcagtgaggtggaaaagaggaaaagtagaacaccagaaagtatcgggttacaagggtgggttaaggcgaaggaatctgagcgggaagaagaagaataaaggtcacttaccagtgagctcttggtggttccgtttctttttgagttttaagtctgtgtgaatgttggttgtttaattttaaatatgtagtgttt | |||
Mapping_target | F54B11 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006816 | |||
Transcript | F54B11.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54B11.3a.1:c.197+63A>G | ||||
Intron_number | 2/11 | ||||
F54B11.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54B11.3b.1:c.197+63A>G | ||||
Intron_number | 2/8 | ||||
Method | WGS_Pasadena_Quinlan |