WormBase Tree Display for Variation: WBVar00217483
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| WBVar00217483 | Name | Public_name | WBVar00217483 | ||
|---|---|---|---|---|---|
| Other_name | pas29259 | ||||
| cewivar00110223 | |||||
| Y47D3A.29.1:c.3790-78A>T | |||||
| HGVSg | CHROMOSOME_III:g.11151730A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47D3A | |
| Flanking_sequences | tctgcaaaaaatatttatttatcagttttattaagaaaaaacgaaaaaaaaagcgatgataaacgaaagaaaacaggcggaaaacaaagcaagataaatggccgctgaaacttgtcggcccctcggccatggcctagaaaccacttttcctcgtccctcgtgaggaaaaagttgcagtgttagggggtgaaatttgcatctgaaaaaagtgcattaaatccaatggattagcccatatttcatatggttaacggtgaaatcaagtaattgagaagtccaaaaatgtggcaacaacttttt | ctgcagaaaaaccctcgtcttcggtggttcagtggttgttggtaaaaataattctcaactttttcgtttaatttcagactgatgcctcgtctccccgccttctattctccggatgtgctcaatgtcaaggatcatgggatcttcaggagcatcaagcagtgattgggaatcaagttgaccgacaaatgtcggaattcgtcgccagacatcatctcgcagcgtttaagtacgatttttgatggaaatttgccgattttctgaaaatttggaaaaaaaacctgcttaaaatcaggagaattg | |||
| Mapping_target | Y47D3A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012936 | |||
| WBGene00305760 | |||||
| Transcript | Y48A6C.12 | ||||
| Y47D3A.29.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47D3A.29.1:c.3790-78A>T | ||||
| Intron_number | 7/10 | ||||
| Method | WGS_Pasadena_Quinlan |
